Curated index of research artefacts referenced in my CV and research portfolio.
FractMorph
Deformable registration
Transformer
Reproducible research
Multi-domain transformer framework for deformable medical image registration
(preprint available; journal revision ongoing, Medical Image Analysis, IF 11.8).
Summary
- Problem: robust multi-modal deformable registration under anatomical variability.
- Contribution: spatial + fractional Fourier domain transformer with full training and ablation pipeline.
- Evidence: competitive benchmarks and open-source reproducible implementation.
Perfusion MRI Analysis Toolkit
Clinical software
BET segmentation
Quantitative imaging
Clinical-facing perfusion MRI pipeline designed for real-world deployment.
Summary
- Problem: reliable perfusion quantification in heterogeneous tumour cases.
- Contribution: preprocessing, BET-based segmentation, ROI tools, and quantitative perfusion metrics.
- Evidence: validated metrics via independent numerical integration and clinical cross-checks.
Availability
Internal clinical software; not publicly released.
Cardiac Mesh Reconstruction & MedMesh
3D anatomy
GNN supervision
In-silico trials
Structure-aware template-based deformation for automated 3D cardiac mesh reconstruction,
supported by MedMesh dataset generation tooling.
Summary
- Problem: CNN-only feature extraction lacks global anatomical context.
- Contribution: GNN-based segmentation supervision capturing local and global structure.
- Evidence: reproducible dataset generation and mesh processing software.